BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB035H12SP1|AL430141
(825 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1543 1159 0.0
>3x_Contig1543
Length = 9648
Score = 1159 bits (549), Expect = 0.0
Identities = 716/818 (87%), Gaps = 5/818 (0%)
Strand = Plus / Minus
Query: 8 agatgagaagatgatatacagcaattaaagtgacattgacattggtaagattaccgatct 67
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2485 agatgagaagatgatatacagcaattaaagtgacattgacattggtaagattaccgatct 2426
Query: 68 gtttgctgatctaccattgtgaatccccgataattatacctcagttccaccatatattac 127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2425 gtttgctgatctaccattgtgaatccccgataattatacctcagttccaccatatattac 2366
Query: 128 ccatggacagtaaagggtaccttaaatcgtatggctggcaagaaggtgaggccttacgga 187
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 2365 ccatggacagtaaagggtaccttaaatcgtatggctggcaagaaggtgaggc-ttacgga 2307
Query: 188 acggaggactraaaaaamcgattcttgtgaaacacaagaaagaaaagaaagggvwtgrat 247
|||||||||| |||||| ||||||||||||||||||||||||| ||||||||| || ||
Sbjct: 2306 acggaggactgaaaaaaccgattcttgtgaaacacaagaaagataagaaagggcttggat 2247
Query: 248 rtgcaccaggrgatgaaagaragatagaarsgtggtrggaasgttwgwtsgarggasaam 307
||||||||| |||| || || ||| |||| |||| ||| | | || ||| ||
Sbjct: 2246 gtgcaccaggacatgat-gacagt--gaagcctggtgggaacgtttgttcgacggacaac 2190
Query: 308 ttsgaaamwaggacaacaaaagsgrgaaagaagggawsksgttsaaasaaaasgaagtsg 367
|| |||| ||||| |||||| | | || |||| ||| ||| |||| ||||| |
Sbjct: 2189 ttcgaaacttggacatcaaaagcgggtccgatgggatctcgttcaaacaaaacgaagtcg 2130
Query: 368 tsgsttcttccntntcnaagagsgnttcnccnctttatsgrtsatttgttagrggkgaag 427
| | ||||||| | || ||||| | ||| || |||||| | | ||||||||| || ||||
Sbjct: 2129 tcgcttcttccatatcaaagagcgattcaccactttatcgatcatttgttagaggtgaag 2070
Query: 428 tgttgaraggtassattarrasagatstgssgtssaasaatgggtstastatrgttrars 487
|||||| ||||| |||| | |||| || || || ||||| | || ||| ||| |
Sbjct: 2069 tgttgaaaggtaccattaaaacagatctgccgtccaacaatggatctactatagttaaac 2010
Query: 488 tggstgtttctgaagtgacatsgaagaaagakaaaragagsaaagasgagaagaagaaga 547
||| ||||||||||||||||| ||||||||| ||| |||| ||||| |||||||||||||
Sbjct: 2009 tggctgtttctgaagtgacatcgaagaaagataaaaagagcaaagacgagaagaagaaga 1950
Query: 548 agaagaagaagargtcgcataaggttgasaagssaaagagtaagsgtaagagagasaaga 607
|||||||||||| ||||||||||||||| ||| |||||||||| ||||| ||| ||||
Sbjct: 1949 agaagaagaagaagtcgcataaggttgacaagccaaagagtaagcataagaaagacaaga 1890
Query: 608 rggataagcataggaaagasaagarggataagaagggtaagrrgggtacacacaagcgta 667
|||||||||||||||||| |||| ||||||||||| |||| |||||||||||||||||
Sbjct: 1889 aggataagcataggaaagacaagaaggataagaaggataagaagggtacacacaagcgta 1830
Query: 668 aaagttcacattgatgttctctttattttcttcttgcagcatcatccctccattgtacgt 727
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1829 aaagttcacattgatgttctctttattttcttcttgcagcatcatccctccattgtacgt 1770
Query: 728 acatgttgtatataaraattctcgttagatagacgatttaaacgcatttagttcatttca 787
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1769 acatgttgtatataaaaattctcgttagatagacgatttaaacgcatttagttcatttca 1710
Query: 788 aggttttcaacaaatagtgt-aamaagctaaattattc 824
|||||||||||||||||||| || ||||||||||||||
Sbjct: 1709 aggttttcaacaaatagtgtaaacaagctaaattattc 1672
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.46 0.724 1.38
Gapped
Lambda K H
1.46 0.724 1.38
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6043
Number of Sequences: 1807
Number of extensions: 6043
Number of successful extensions: 828
Number of sequences better than 1.0e-20: 1
length of query: 825
length of database: 10,358,551
effective HSP length: 15
effective length of query: 810
effective length of database: 10,331,446
effective search space: 8368471260
effective search space used: 8368471260
T: 0
A: 40
X1: 5 (10.6 bits)
X2: 14 (29.6 bits)
S1: 11 (23.7 bits)
S2: 47 (99.7 bits)